PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G06950.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 749aa    MW: 80191 Da    PI: 3.8779
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G06950.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.53.7e-2581471128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dke 91 
                      lppG+rF+P d+elv++yL +++++++++l+ vi+e+d + + Pw L + +  + +e +fF++++ k+ +gkr++r +   g+W+ +    d e
  OGLUM01G06950.1   8 LPPGVRFDPADDELVSRYLLRRLRKQPIPLHGVIHEADPLGASPWMLLADHGRGGDEAFFFAEARAKNVRGKRQKRtVEGGGFWQGQRVcvDGE 101
                      79****************************99***************877777889********************555599**9665423444 PP

              NAM  92 vlsk.....kgel........vglkktLvfykgrapkgektdWvmheyrl 128
                       ls      +            + k +L f+ ++ ++g ++ Wvmhey++
  OGLUM01G06950.1 102 RLSVpggdgG--GevgggleiEWRKYMLSFF-AEGERG-SSGWVMHEYAI 147
                      4443566651..0445666647777888899.455554.89*******86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-294166IPR003441NAC domain
PROSITE profilePS5100528.1858166IPR003441NAC domain
PfamPF023651.6E-159146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 749 aa     Download sequence    Send to blast
MAAAADGLPP GVRFDPADDE LVSRYLLRRL RKQPIPLHGV IHEADPLGAS PWMLLADHGR  60
GGDEAFFFAE ARAKNVRGKR QKRTVEGGGF WQGQRVCVDG ERLSVPGGDG GGEVGGGLEI  120
EWRKYMLSFF AEGERGSSGW VMHEYAITAP DDLASSPIRL YRVRFSGHGK KRKREPERLG  180
ARVHDDDVDG GQRAKPRRAV AETALFVQPS AVDCAESAGQ SFSGAIEPVF HDLPDMMPEQ  240
ADAGDTTETT AAVVNLTDTM SEQPVLPLAA DGDDQSSYGV IDPAFRDLAD LIVLPPEPDD  300
GGMERATPCT PMSETALFEQ QGPPLAPGNA DCADHQSSYG VIDPAFCEQA DAGEAETTVS  360
AAVVNQNYSM ALCDFNFPEV LSYVDFTAGM EPSWQQRWPP MSESAPFEQQ EPPLAPVAMV  420
DLLPGNADCA DHQSCSGVID QAFRDLPDMT VLPPEQADTG GGAETTTAMV SLTDKLKYSS  480
SMDGEAAPAW CDFDFPESTD EVLSYINFTA GAHDDNDGSV ERAAPWRPAS ETAMFEQPSA  540
VDLPPGDADC AESADQSFSG VIEPVFRDLR DMVREQADAG DTAETTAAVV NQNYSMALCD  600
FDFPESTGEA LSYIDFTAGA HTDNDGGVSE TAMFEQPGSP PQHDPLPMDA DGADQSSSSG  660
LLIDTVFRDH AEPIVLPLEQ ADAGGGAAAA VNPMDKQKYS SSMDGEAAPA WCDSDFPESI  720
DEVLSYIDFS TDDTSCIDFS MDDLFDLAD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645973.10.0PREDICTED: uncharacterized protein LOC107275504
TrEMBLA0A0D9Y4M10.0A0A0D9Y4M1_9ORYZ; Uncharacterized protein
STRINGLOC_Os07g27340.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15243914
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.23e-12NAC domain containing protein 47